Peer-reviewed journal papers

J. Soch, A. P. Meyer, J.-D. Haynes, C. Allefeld. How to improve parameter estimates in GLM-based fMRI data analysis: Cross-validated Bayesian model averaging. NeuroImage, 158: 186–195, 2017. bioRxiv 095778 | doi:10.1016/j.neuroimage.2017.06.056 ]
T. B. Christophel, C. Allefeld, C. Endisch, J.-D. Haynes. View-independent working memory representations of artificial shapes in prefrontal and posterior regions of the human brain. Cerebral Cortex, 1–16, 2017. doi:10.1093/cercor/bhx119 ]
C. Allefeld, K. Görgen, J.-D. Haynes. Valid population inference for information-based imaging: From the second-level t-test to prevalence inference. NeuroImage, 141: 378–392, 2016. arXiv:1512.00810 | doi:10.1016/j.neuroimage.2016.07.040 ]
J. Soch, J.-D. Haynes., C. Allefeld. How to avoid mismodelling in GLM-based fMRI data analysis: Cross-validated Bayesian model selection. NeuroImage, 141: 469–489, 2016. 10.1016/j.neuroimage.2016.07.047 ]
M. Schultze-Kraft, D. Birman, M. Rusconi, C. Allefeld, K. Görgen, S. Dähne, B. Blankertz, J.-D. Haynes. The point of no return in vetoing self-initiated movements. Proceedings of the National Academy of Sciences, 113(4): 1080–1085, 2016. doi:10.1073/pnas.1513569112 ]
K. Ritter, J. Schumacher, M. Weygandt, R. Buchert, C. Allefeld, J.-D. Haynes, & ADNI. Multimodal prediction of conversion to Alzheimer based on incomplete biomarkers. Alzheimer's & Dementia: Diagnosis, Assessment & Disease Monitoring, 1(2): 206–215, 2015. doi:10.1016/j.dadm.2015.01.006 ]
M. Weygandt, H. Hummel, K. Schregel, K. Ritter, C. Allefeld, E. Dommes, P. Huppke, J.-D. Haynes, J. Würfel, J. Gärtner. MRI-based diagnostic biomarkers for early onset pediatric multiple sclerosis. NeuroImage Clinical, 7: 400–408, 2015. doi:10.1016/j.nicl.2014.06.015 ]
C. Allefeld, J.-D. Haynes. Searchlight-based multi-voxel pattern analysis of fMRI by cross-validated MANOVA. NeuroImage, 89: 345–357, 2014. arXiv:1401.4122 | doi:10.1016/j.neuroimage.2013.11.043 ]
F. Ramírez, R. Cichy, C. Allefeld, J.-D. Haynes. The neural code for face orientation in the human fusiform face area. The Journal of Neuroscience, 34(36): 12155–12167, 2014. doi:10.1523/jneurosci.3156-13.2014 ]
I. Winkler, S. Brandl, F. Horn, E. Waldburger, C. Allefeld, M. Tangermann. Robust artifactual independent component classification for BCI practitioners. Journal of Neural Engineering, 11(3): 035013, 2014. doi:10.1088/1741-2560/11/3/035013 ]
A. K. Kuhlen*, C. Allefeld*, J.-D. Haynes. Content-specific coordination of listeners’ to speakers’ EEG during communication. Frontiers in Human Neuroscience, 6: 266, 2012. doi:10.3389/fnhum.2012.00266 ]
   * equal contribution
K. Hackmack, F. Paul, M. Weygandt, C. Allefeld, J.-D. Haynes, & ADNI. Multi-scale classification of disease using structural MRI and wavelet transform. NeuroImage, 62(1): 48–58, 2012. doi:10.1016/j.neuroimage.2012.05.022 ]
C. Allefeld, P. Pütz, K. Kastner, J. Wackermann. Flicker-light induced visual phenomena: Frequency dependence and specificity of whole percepts and percept features. Consciousness and Cognition, 20(4): 1344–1362, 2011. doi:10.1016/j.concog.2010.10.026 | local ]
C. Allefeld, H. Atmanspacher, J. Wackermann. Mental states as macrostates emerging from brain electrical dynamics. Chaos, 19(1): 015102, 2009. arXiv:0810.0479 | doi:10.1063/1.3072788 | local ]
C. Allefeld. The Hollow of Being: What can we learn from Merleau-Ponty's ontology for a science of consciousness? Mind and Matter, 6(2): 235–255, 2008. local | website ]
J. Wackermann, P. Pütz, C. Allefeld. Ganzfeld-induced hallucinatory experience, its phenomenology and cerebral electrophysiology. Cortex, 44(10): 1364–1378, 2008. doi:10.1016/j.cortex.2007.05.003 ]
C. Allefeld, S. Bialonski. Detecting synchronization clusters in multivariate time series via coarse-graining of Markov chains. Physical Review E, 76: 066207, 2007. arXiv:0707.2479 | doi:10.1103/PhysRevE.76.066207 ]
J. Wackermann, C. Allefeld. On the meaning and interpretation of global descriptors of brain electrical activity. Including a reply to X. Pei et al. International Journal of Psychophysiology, 64(2): 199–210, 2007. doi:10.1016/j.ijpsycho.2007.02.003 ]
C. Allefeld, M. Müller, J. Kurths. Eigenvalue decomposition as a generalized Synchronization Cluster Analysis. International Journal of Bifurcation and Chaos, 17(10): 3493–3497, 2007. arXiv:0706.3375 | doi:10.1142/S0218127407019251 ]
C. Allefeld. About the derivation of the SCA algorithm. International Journal of Bifurcation and Chaos, 16(12): 3705–3706, 2006. doi:10.1142/S0218127406017099 | urn:nbn:de:kobv:517-opus-20137 ]
C. Allefeld, S. Frisch, M. Schlesewsky. Detection of early cognitive processing by event-related phase synchronization analysis. NeuroReport, 16(1): 13–16, 2005. urn:nbn:de:kobv:517-opus-20126 ]
C. Allefeld, J. Kurths. An approach to multivariate phase synchronization analysis and its application to event-related potentials. International Journal of Bifurcation and Chaos, 14(2): 417–426, 2004. doi:10.1142/S0218127404009521 | urn:nbn:de:kobv:517-opus-20106 ]
C. Allefeld, J. Kurths. Testing for phase synchronization. International Journal of Bifurcation and Chaos, 14(2): 405–416, 2004. doi:10.1142/S021812740400951X | urn:nbn:de:kobv:517-opus-20091 ]

Other publications

C. Allefeld, J.-D. Haynes. Multi-voxel pattern analysis. In A. W. Toga, editor, Brain Mapping: An Encyclopedic Reference, vol. 1, pages 641–646. Academic Press, 2015. ISBN 9780123970251 | website ]
C. S. Soon, C. Allefeld, C. Bogler, J. Heinzle, J.-D. Haynes. Predictive brain signals best predict upcoming and not previous choices. Comment on “Flipping a coin in your head without monitoring outcomes?” by M. Lages et al. Frontiers in Psychology, 5: 406, 2014. doi:10.3389/fpsyg.2014.00406 ]
A. K. Kuhlen, C. Allefeld, S. Anders, J.-D. Haynes. Towards a multi-brain perspective on communication in dialogue. In R. Willems, editor, Cognitive Neuroscience of Natural Language Use, pages 182–200. Cambridge University Press, 2015. ISBN 9781107042018 | website ]
C. Allefeld, C. S. Soon, C. Bogler, J. Heinzle, J.-D. Haynes. Sequential dependencies between trials in free choice tasks. Technical report, 2013. arXiv:1311.0753 ]
J. Heinzle, C. Allefeld, J.-D. Haynes. Information flow, dynamical systems theory and the human brain. Comment on “Information flow dynamics in the brain” by M. I. Rabinovich et al. Physics of Life Reviews, 9(1): 78–79, 2011. doi:10.1016/j.plrev.2011.12.007 ]
J. Wackermann, C. Allefeld. State space representation and global descriptors of brain electrical activity. In C. M. Michel et al., editors, Electrical Neuroimaging: A Systematic Introduction, pages 191–214. Cambridge University Press, 2009. ISBN 9780521879798 | website ]
C. Allefeld. Instantaneous oscillatory direction and phase for multivariate timeseries. Technical report, 2008. arXiv:0807.3466 ]
C. Allefeld, P. beim Graben, J. Kurths, editors. Chaos and Complexity Letters, volume 2(2/3). Nova Science Publishers, 2007. Special Issue on Advanced Methods of Electrophysiological Signal Analysis and Symbol Grounding? Dynamical Systems Approaches to Language. Appeared also as a book: Nova Science Publishers, 2008. ISBN978-1604560220 | website ]
C. Allefeld. Phase Synchronization Analysis of Event-Related Brain Potentials in Language Processing. PhD thesis, University of Potsdam, 2004. urn:nbn:de:kobv:517-0001873 ]
C. Allefeld, S. Frisch. Phase synchronization analysis of event-related potentials in language processing. In S. Bocaletti et al., editors, Experimental Chaos: 8th Experimental Chaos Conference, pages 106–111. AIP, 2004. urn:nbn:de:kobv:517-opus-20113 ]
C. Allefeld, J. Kurths. Multivariate phase synchronization analysis of EEG data. IEICE Transactions on Fundamentals, E86-A(9): 2218–2221, 2003.
C. Allefeld. Erkenntnistheoretische Konsequenzen der Systemtheorie. Die Theorie selbstreferentieller Systeme und der Konstruktivismus. Master's thesis, Freie Universität Berlin, 1999. website ]